Convert unparsed rate functions into deterministic mean ODE functions.

Convert unparsed rate functions into deterministic mean ODE functions.

rate_fcns_4_ode(rate_fcns, compartment_codes, flow_matrix)

Arguments

rate_fcns

list of rates, as returned by stem_dynamics

compartment_codes

vector of compartment codes

flow_matrix

matrix indicating compartment flow, whose transpose is the stoichiometry matrix

Value

list containing a character vector with the rate functions and a named numeric vector of counting process compartment codes